Description
ATPase type 13A1 [Source:HGNC Symbol;Acc:24215]
Gene Synonyms
ATP13A, CGI-152, FLJ31858, KIAA1825
Location
Chromosome 19: 19,756,007-19,774,502 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 15 transcripts (splice variants), 201 orthologues and 21 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357324.6 | ATP13A1-001 | 3861 | 1204aa | ENSP00000349877.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32970 | Q8N3E5 Q9HD20 | NM_020410.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000291503.5 | ATP13A1-003 | 3483 | 1086aa | ENSP00000291503.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8N3E5 Q9HD20 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000455627.1 | ATP13A1-009 | 554 | 185aa | ENSP00000411891.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000496082.1 | ATP13A1-014 | 698 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000487364.1 | ATP13A1-008 | 541 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473243.1 | ATP13A1-004 | 4729 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000469641.1 | ATP13A1-005 | 4241 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497556.1 | ATP13A1-007 | 2442 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467160.1 | ATP13A1-006 | 2431 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491221.1 | ATP13A1-016 | 937 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474955.1 | ATP13A1-011 | 927 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497156.1 | ATP13A1-013 | 715 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497762.1 | ATP13A1-012 | 575 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492774.1 | ATP13A1-010 | 482 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471063.2 | ATP13A1-015 | 373 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
