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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SYDE1 ENSG00000105137

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Description

synapse defective 1, Rho GTPase, homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:25824]

Gene Synonyms

7h3, FLJ13511

Location

Chromosome 19: 15,218,214-15,225,799 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 5 transcripts (splice variants), 187 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342784.2	SYDE1-001	3264	735aa	ENSP00000341489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12324	Q6ZW31	NM_033025.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600252.1	SYDE1-003	3832	392aa	ENSP00000469489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXZ8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600440.1	SYDE1-002	3058	668aa	ENSP00000470733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZW31	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000602203.1	SYDE1-005	571	190aa	ENSP00000471553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000597977.1	SYDE1-004	539	170aa	ENSP00000473151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R3D3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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