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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D17 ENSG00000104946

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Description

TBC1 domain family, member 17 [Source:HGNC Symbol;Acc:25699]

Gene Synonyms

FLJ12168

Location

Chromosome 19: 50,380,682-50,392,005 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 8 transcripts (splice variants), 189 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221543.5	TBC1D17-001	2366	648aa	ENSP00000221543.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12785	Q96RQ7 Q9HA65	NM_024682.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535102.2	TBC1D17-003	2025	615aa	ENSP00000446323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54294	Q96RQ7 Q9HA65	NM_001168222.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000599049.2	TBC1D17-005	1742	480aa	ENSP00000472647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000594984.1	TBC1D17-006	1441	344aa	ENSP00000469747.1	Nonsense mediated decay		M0QYC9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000594996.1	TBC1D17-002	1161	75aa	ENSP00000469010.1	Nonsense mediated decay		M0QXA2	-	-
ENST00000598789.1	TBC1D17-009	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000596243.1	TBC1D17-004	2831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600354.1	TBC1D17-007	1547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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