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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: FCGRT ENSG00000104870

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Description

Fc fragment of IgG, receptor, transporter, alpha [Source:HGNC Symbol;Acc:3621]

Gene Synonyms

FCRN, alpha-chain

Location

Chromosome 19: 50,010,073-50,029,590 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 19 transcripts (splice variants), 457 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221466.5	FCGRT-001	1798	365aa	ENSP00000221466.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12770	M0QYM4 M0R266 M0R2T3 P55899 Q8N166	NM_001136019.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000426395.3	FCGRT-004	1559	365aa	ENSP00000410798.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12770	M0QYM4 M0R266 M0R2T3 P55899 Q8N166	NM_004107.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000596975.1	FCGRT-013	1054	273aa	ENSP00000471118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0A9 Q8N166	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000598076.1	FCGRT-016	676	153aa	ENSP00000471232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0H0 M0R2T3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000599988.1	FCGRT-020	660	99aa	ENSP00000471300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0K7 Q8N166	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600273.1	FCGRT-010	582	167aa	ENSP00000469933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYM4 M0R266 Q8N166	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599701.1	FCGRT-012	579	38aa	ENSP00000472794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2T3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000598491.1	FCGRT-009	578	141aa	ENSP00000472350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R266 Q8N166	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593381.1	FCGRT-014	566	189aa	ENSP00000472256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2T3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000598319.1	FCGRT-007	1888	211aa	ENSP00000472604.1	Nonsense mediated decay		M0QYN1 M0R2T3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598949.1	FCGRT-015	1888	211aa	ENSP00000469949.1	Nonsense mediated decay		M0QYN1 M0R2T3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000598927.1	FCGRT-005	1616	225aa	ENSP00000469968.1	Nonsense mediated decay		M0QYM4 M0QYN9 M0R266 M0R2T3 Q8N166	-	-
ENST00000594823.1	FCGRT-017	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000595677.1	FCGRT-018	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000595881.1	FCGRT-002	2681	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000452439.1	FCGRT-006	1351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598936.1	FCGRT-011	870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593431.1	FCGRT-019	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596147.1	FCGRT-008	383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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