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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LIN7B ENSG00000104863

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Description

lin-7 homolog B (C. elegans) [Source:HGNC Symbol;Acc:17788]

Gene Synonyms

LIN-7B, MALS-2, MALS2, VELI2

Location

Chromosome 19: 49,617,581-49,621,717 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 7 transcripts (splice variants), 179 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000221459.2	LIN7B-001	755	207aa	ENSP00000221459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12757	Q9HAP6	NM_022165.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000391864.3	LIN7B-002	582	137aa	ENSP00000375737.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HAP6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486217.2	LIN7B-006	367	115aa	ENSP00000474643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000595200.1	LIN7B-007	795	132aa	ENSP00000472804.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469137.1	LIN7B-003	1057	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474252.1	LIN7B-004	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465141.1	LIN7B-005	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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