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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SNRNP70 ENSG00000104852

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Description

small nuclear ribonucleoprotein 70kDa (U1) [Source:HGNC Symbol;Acc:11150]

Gene Synonyms

RNPU1Z, RPU1, SNRNP70, SNRP70, Snp1, U1-70K, U170K, U1AP, U1AP1, U1RNP

Location

Chromosome 19: 49,588,676-49,611,862 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 10 transcripts (splice variants), 162 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000598441.1	SNRNP70-001	1574	437aa	ENSP00000472998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12756	M0QX04 P08621 Q9UFS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000221448.5	SNRNP70-003	1603	428aa	ENSP00000221448.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX04 P08621 Q9UFS1	NM_003089.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000598984.1	SNRNP70-007	547	94aa	ENSP00000470023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX04 M0QYR1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601411.1	SNRNP70-009	377	33aa	ENSP00000468828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000401730.1	SNRNP70-004	3144	166aa	ENSP00000385077.1	Nonsense mediated decay		M0QX04 M0QYR1 P08621	-	-
ENST00000601065.1	SNRNP70-002	1757	166aa	ENSP00000468952.1	Nonsense mediated decay		M0QX04 M0QYR1 P08621	-	-
ENST00000595231.1	SNRNP70-005	1673	166aa	ENSP00000471006.1	Nonsense mediated decay		M0QX04 M0QYR1 P08621	-	-
ENST00000544278.2	SNRNP70-006	3221	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000597936.1	SNRNP70-008	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599687.1	SNRNP70-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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