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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: KNOP1 ENSG00000103550

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Description

lysine-rich nucleolar protein 1 [Source:HGNC Symbol;Acc:34404]

Gene Synonyms

101F10.1, C16orf88, FAM191A, TSG118

Location

Chromosome 16: 19,714,902-19,729,557 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219837.7	KNOP1-001	4786	458aa	ENSP00000219837.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42127	H3BMC9 H3BNU8 Q1ED39	NM_001012991.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000568230.1	KNOP1-005	1311	137aa	ENSP00000455015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BNU8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000564480.1	KNOP1-002	1020	79aa	ENSP00000454329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMC9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567367.1	KNOP1-003	595	199aa	ENSP00000455369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000565844.1	KNOP1-004	1394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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