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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TOX3 ENSG00000103460

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Description

TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:11972]

Gene Synonyms

CAGF9, TNRC9

Location

Chromosome 16: 52,471,917-52,581,714 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000219746.9	TOX3-003	3233	576aa	ENSP00000219746.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54009	H3BTZ9 O15405	NM_001080430.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407228.3	TOX3-002	3124	571aa	ENSP00000385705.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54008	O15405	NM_001146188.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000563091.1	TOX3-004	572	166aa	ENSP00000457401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568436.1	TOX3-005	548	60aa	ENSP00000463843.1	Nonsense mediated decay		J3QQQ6	-	-
ENST00000566696.1	TOX3-006	3414	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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