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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COTL1 ENSG00000103187

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Description

coactosin-like 1 (Dictyostelium) [Source:HGNC Symbol;Acc:18304]

Gene Synonyms

CLP

Location

Chromosome 16: 84,599,200-84,651,683 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 6 transcripts (splice variants), 196 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262428.4	COTL1-001	1843	142aa	ENSP00000262428.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10947	H3BT58 Q14019	NM_021149.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000564057.1	COTL1-002	1677	73aa	ENSP00000457033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT58	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000567278.1	COTL1-003	5330	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567786.1	COTL1-007	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561707.1	COTL1-006	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564662.1	COTL1-005	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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