Description
TSC22 domain family, member 1 [Source:HGNC Symbol;Acc:16826]
Gene Synonyms
KIAA1994, MGC17597, Ptg-2, TGFB1I4, TSC22
Location
Chromosome 13: 45,007,655-45,151,283 reverse strand.
GRCh37:CM000675.1
About this gene
This gene has 11 transcripts (splice variants), 191 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000458659.2 | TSC22D1-001 | 4820 | 1073aa | ENSP00000397435.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31966 | C9IZ15 Q15714 | NM_183422.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000501704.2 | TSC22D1-201 | 2335 | 570aa | ENSP00000437414.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58291 | C9IZ15 Q15714 | NM_001243799.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000261489.2 | TSC22D1-002 | 1749 | 144aa | ENSP00000261489.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9392 | C9JYW3 Q15714 | NM_006022.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000493016.1 | TSC22D1-008 | 690 | 142aa | ENSP00000418739.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ15 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000472477.1 | TSC22D1-009 | 349 | 41aa | ENSP00000419864.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JYW3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000486464.1 | TSC22D1-005 | 1093 | 149aa | ENSP00000417476.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000460842.1 | TSC22D1-006 | 903 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496314.1 | TSC22D1-004 | 608 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000487881.2 | TSC22D1-003 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000437455.2 | TSC22D1-007 | 434 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496838.1 | TSC22D1-010 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
