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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: VSIG1 ENSG00000101842

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Description

V-set and immunoglobulin domain containing 1 [Source:HGNC Symbol;Acc:28675]

Gene Synonyms

1700062D20Rik, GPA34, MGC44287, dJ889N15.1

Location

Chromosome X: 107,288,200-107,322,414 forward strand.

GRCh37:CM000685.1

About this gene

This gene has 5 transcripts (splice variants), 165 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000415430.3	VSIG1-201	3236	423aa	ENSP00000402219.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55474	C9JY48 Q86XK7	NM_001170553.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000217957.5	VSIG1-001	2997	387aa	ENSP00000217957.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14535	Q86XK7	NM_182607.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000458383.1	VSIG1-003	570	168aa	ENSP00000407102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485533.1	VSIG1-002	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479635.1	VSIG1-004	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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