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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH20 ENSG00000101542

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Description

cadherin 20, type 2 [Source:HGNC Symbol;Acc:1760]

Gene Synonyms

CDH7L3, Cdh7

Location

Chromosome 18: 59,000,815-59,223,006 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262717.4	CDH20-001	3882	801aa	ENSP00000262717.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11977	K7ESP2 Q8N9J3 Q9HBT6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536675.2	CDH20-201	2855	801aa	ENSP00000444767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11977	K7ESP2 Q8N9J3 Q9HBT6	NM_031891.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538374.1	CDH20-002	2683	801aa	ENSP00000442226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11977	K7ESP2 Q8N9J3 Q9HBT6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000587582.1	CDH20-003	533	86aa	ENSP00000468806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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