Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MAP1LC3A ENSG00000101460

.

Description

microtubule-associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:6838]

Gene Synonyms

ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3

Location

Chromosome 20: 33,134,658-33,148,149 forward strand.

GRCh37:CM000682.1

About this gene

This gene has 4 transcripts (splice variants), 195 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374837.3	MAP1LC3A-001	961	125aa	ENSP00000363970.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13237	Q9H492	NM_181509.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000360668.3	MAP1LC3A-002	1574	121aa	ENSP00000353886.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13238	Q9H492	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397709.1	MAP1LC3A-003	698	121aa	ENSP00000380821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13238	Q9H492	NM_032514.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476428.1	MAP1LC3A-004	851	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.