Description
serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787]
Gene Synonyms
HRS, SFRS5, SRP40
Location
Chromosome 14: 70,193,617-70,238,722 forward strand.
GRCh37:CM000676.1
About this gene
This gene has 20 transcripts (splice variants), 206 orthologues and 8 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000553521.1 | SRSF5-003 | 2815 | 272aa | ENSP00000452123.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32109 | G3V5K8 Q13243 Q86U32 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394366.2 | SRSF5-005 | 1638 | 272aa | ENSP00000377892.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32109 | G3V5K8 Q13243 Q86U32 | NM_001039465.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000557154.1 | SRSF5-002 | 1500 | 272aa | ENSP00000451088.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32109 | G3V5K8 Q13243 Q86U32 | NM_006925.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000553635.1 | SRSF5-004 | 1412 | 269aa | ENSP00000451391.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q13243 Q86U32 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000451983.2 | SRSF5-201 | 822 | 138aa | ENSP00000402734.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DUA4 G3V5K8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000553369.1 | SRSF5-018 | 613 | 138aa | ENSP00000452449.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DUA4 G3V5K8 | - | - | |
| ENST00000554021.1 | SRSF5-010 | 567 | 138aa | ENSP00000450918.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DUA4 G3V5K8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000555349.1 | SRSF5-011 | 565 | 124aa | ENSP00000452090.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DJK0 G3V5K8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000553548.1 | SRSF5-016 | 526 | 99aa | ENSP00000452400.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V5K8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000555547.1 | SRSF5-007 | 2057 | 138aa | ENSP00000474409.1 | Nonsense mediated decay | B4DUA4 G3V5K8 | - | - | |
| ENST00000556587.1 | SRSF5-019 | 1863 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000556647.1 | SRSF5-013 | 644 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000554465.1 | SRSF5-001 | 3044 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556184.1 | SRSF5-006 | 2443 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000554929.1 | SRSF5-008 | 947 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557460.1 | SRSF5-015 | 939 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000557435.1 | SRSF5-012 | 622 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556436.1 | SRSF5-017 | 611 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000555412.1 | SRSF5-009 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000556330.1 | SRSF5-014 | 546 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
