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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PSMC6 ENSG00000100519

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Description

proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:HGNC Symbol;Acc:9553]

Gene Synonyms

CADP44, P44, SUG2, p42

Location

Chromosome 14: 53,173,890-53,195,305 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 18 transcripts (splice variants), 228 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445930.2	PSMC6-001	2188	403aa	ENSP00000401802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9710	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000606149.1	PSMC6-018	1560	389aa	ENSP00000475721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P62333	NM_002806.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000556813.1	PSMC6-017	785	262aa	ENSP00000451156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000555339.1	PSMC6-016	583	194aa	ENSP00000452048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554044.1	PSMC6-005	844	70aa	ENSP00000451340.2	Nonsense mediated decay		H0YJE9	-	-
ENST00000555175.1	PSMC6-012	752	67aa	ENSP00000452388.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553899.1	PSMC6-002	706	36aa	ENSP00000452511.2	Nonsense mediated decay		H0YJY8	-	-
ENST00000557240.1	PSMC6-015	625	97aa	ENSP00000452072.2	Nonsense mediated decay		H0YJT1	-	-
ENST00000557517.1	PSMC6-007	580	14aa	ENSP00000452253.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553798.1	PSMC6-006	563	33aa	ENSP00000451241.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557557.1	PSMC6-010	2939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554952.1	PSMC6-008	1037	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000458604.2	PSMC6-009	1093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557085.1	PSMC6-011	890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000551328.2	PSMC6-014	650	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557632.1	PSMC6-013	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555887.1	PSMC6-003	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554956.1	PSMC6-004	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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