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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: RTDR1 ENSG00000100218

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Description

rhabdoid tumor deletion region gene 1 [Source:HGNC Symbol;Acc:13437]

Location

Chromosome 22: 23,401,593-23,487,208 reverse strand.

GRCh37:CM000684.1

About this gene

This gene has 5 transcripts (splice variants) and 199 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216036.4	RTDR1-001	1291	348aa	ENSP00000216036.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13803	Q9UHP6	NM_014433.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000439064.1	RTDR1-005	695	67aa	ENSP00000406822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000406876.1	RTDR1-002	519	108aa	ENSP00000385567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCI8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452757.1	RTDR1-003	509	67aa	ENSP00000391552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZU8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000421213.1	RTDR1-004	323	73aa	ENSP00000414155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3W6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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