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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDH11Y ENSG00000099715

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Description

protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:15813]

Gene Synonyms

PCDH-PC, PCDH-X, PCDH11, PCDH22, PCDHX, PCDHY

Location

Chromosome Y: 4,868,267-5,610,265 forward strand.

GRCh37:CM000686.1

About this gene

This gene has 4 transcripts (splice variants), 194 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000362095.5	PCDH11Y-003	4220	1048aa	ENSP00000355419.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14777	Q9BZA8	NM_032972.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000400457.2	PCDH11Y-001	8240	1319aa	ENSP00000383306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q70LR4 Q70LR5	NM_032973.2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000333703.4	PCDH11Y-002	4710	1037aa	ENSP00000330552.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14776	Q9BZA8	NM_032971.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000215473.6	PCDH11Y-201	4023	1340aa	ENSP00000215473.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSR5 Q70LR4 Q70LR5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

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Summary

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