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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: STX1B ENSG00000099365

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Description

syntaxin 1B [Source:HGNC Symbol;Acc:18539]

Gene Synonyms

STX1B1, STX1B2

Location

Chromosome 16: 31,000,577-31,021,949 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 5 transcripts (splice variants), 197 orthologues, 12 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215095.5	STX1B-001	4664	288aa	ENSP00000215095.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10699	H3BT82 P61266	NM_052874.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569638.1	STX1B-002	4178	204aa	ENSP00000457067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BT82	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565419.1	STX1B-003	1208	277aa	ENSP00000455899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P61266	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000566211.1	STX1B-005	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561836.1	STX1B-004	418	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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