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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SRPK1 ENSG00000096063

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Description

SRSF protein kinase 1 [Source:HGNC Symbol;Acc:11305]

Gene Synonyms

SFRSK1

Location

Chromosome 6: 35,800,743-35,889,119 reverse strand.

GRCh37:CM000668.1

About this gene

This gene has 14 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373825.2	SRPK1-001	4592	655aa	ENSP00000362931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47415	D6RBF8 Q96SB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373822.1	SRPK1-201	4358	547aa	ENSP00000362928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBF8 Q5R363	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423325.2	SRPK1-002	4357	639aa	ENSP00000391069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DS61 D6RBF8	NM_003137.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361690.3	SRPK1-005	4286	671aa	ENSP00000354674.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBF8 H3BLV9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510290.1	SRPK1-010	621	146aa	ENSP00000424170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507909.1	SRPK1-007	581	118aa	ENSP00000424323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB98	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512445.1	SRPK1-004	559	155aa	ENSP00000424068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508473.1	SRPK1-006	858	76aa	ENSP00000425172.1	Nonsense mediated decay		D6RDZ3	-	-
ENST00000507292.1	SRPK1-012	634	42aa	ENSP00000422886.1	Nonsense mediated decay		H0Y932	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000373821.2	SRPK1-008	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000346162.6	SRPK1-003	4762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513367.1	SRPK1-009	634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505885.1	SRPK1-013	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502969.1	SRPK1-011	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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