Description
nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065]
Gene Synonyms
NPAP60, NPAP60L
Location
Chromosome 22: 45,559,722-45,583,896 forward strand.
GRCh37:CM000684.1
About this gene
This gene has 20 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000347635.4 | NUP50-001 | 5233 | 468aa | ENSP00000345895.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14062 | B4E2D3 Q9UKX7 | NM_007172.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000407019.2 | NUP50-002 | 2059 | 440aa | ENSP00000385555.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14063 | B4E2D3 Q9UKX7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000425733.2 | NUP50-201 | 2030 | 218aa | ENSP00000406928.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2D3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000396096.2 | NUP50-003 | 1895 | 440aa | ENSP00000379403.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14063 | B4E2D3 Q9UKX7 | NM_153645.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000417702.1 | NUP50-007 | 584 | 8aa | ENSP00000394450.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000424634.1 | NUP50-005 | 579 | 45aa | ENSP00000415062.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000432340.1 | NUP50-013 | 551 | 4aa | ENSP00000400465.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000422489.1 | NUP50-017 | 543 | 178aa | ENSP00000416264.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B0QY21 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430547.1 | NUP50-010 | 537 | 76aa | ENSP00000397960.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B1AHA5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000445721.1 | NUP50-011 | 443 | 10aa | ENSP00000398297.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000419387.1 | NUP50-016 | 1018 | 30aa | ENSP00000391987.1 | Nonsense mediated decay | F2Z3L9 | - | - | |
| ENST00000434760.1 | NUP50-009 | 763 | 30aa | ENSP00000388426.1 | Nonsense mediated decay | F2Z3L9 | - | - | |
| ENST00000486184.1 | NUP50-018 | 821 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461194.1 | NUP50-014 | 550 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461437.1 | NUP50-008 | 531 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000491860.1 | NUP50-019 | 493 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493456.1 | NUP50-012 | 478 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000484186.1 | NUP50-015 | 431 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469163.1 | NUP50-004 | 3507 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000497960.1 | NUP50-006 | 986 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
