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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TFAP4 ENSG00000090447

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Description

transcription factor AP-4 (activating enhancer binding protein 4) [Source:HGNC Symbol;Acc:11745]

Gene Synonyms

AP-4, BHLHC41, bHLHc41

Location

Chromosome 16: 4,307,187-4,323,076 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 7 transcripts (splice variants), 257 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000204517.6	TFAP4-001	2215	338aa	ENSP00000204517.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10510	I3L254 Q01664	NM_003223.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000572393.1	TFAP4-007	507	115aa	ENSP00000459390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L254	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000573476.1	TFAP4-006	785	167aa	ENSP00000460067.1	Nonsense mediated decay		I3L301	-	-
ENST00000574639.1	TFAP4-005	595	44aa	ENSP00000461352.1	Nonsense mediated decay		I3L4L6	-	-
ENST00000575320.1	TFAP4-003	6491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575672.1	TFAP4-004	1613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575300.1	TFAP4-002	1326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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