Description
solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 [Source:HGNC Symbol;Acc:26175]
Gene Synonyms
FLJ22233, NCKX6, NCLX, SLC24A6
Location
Chromosome 12: 113,736,564-113,797,298 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 16 transcripts (splice variants) and 207 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000552014.1 | SLC8B1-001 | 3289 | 584aa | ENSP00000447091.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31909 | F8VR99 F8VTU4 F8VWW9 Q6J4K2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000202831.3 | SLC8B1-201 | 2975 | 584aa | ENSP00000202831.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31909 | F8VR99 F8VTU4 F8VWW9 Q6J4K2 | NM_024959.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000550047.1 | SLC8B1-006 | 2493 | 99aa | ENSP00000447585.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000546737.1 | SLC8B1-002 | 1656 | 528aa | ENSP00000450081.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTU4 F8VWW9 Q6J4K2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000549069.1 | SLC8B1-011 | 1058 | 143aa | ENSP00000449519.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VW44 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000548186.1 | SLC8B1-014 | 996 | 131aa | ENSP00000449448.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTU4 F8VWW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549181.1 | SLC8B1-015 | 925 | 231aa | ENSP00000448703.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR99 F8VTU4 F8VWW9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549372.1 | SLC8B1-008 | 555 | 103aa | ENSP00000447972.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VTU4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550672.1 | SLC8B1-007 | 2925 | 404aa | ENSP00000448758.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000549605.1 | SLC8B1-012 | 850 | 53aa | ENSP00000448749.1 | Nonsense mediated decay | F8W134 | - | - | |
| ENST00000552613.1 | SLC8B1-013 | 647 | 53aa | ENSP00000447502.1 | Nonsense mediated decay | F8W134 | - | - | |
| ENST00000553238.1 | SLC8B1-004 | 1675 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000548518.1 | SLC8B1-009 | 664 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000551230.1 | SLC8B1-010 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000552565.1 | SLC8B1-005 | 2287 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548477.1 | SLC8B1-003 | 2053 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
