Description
protein tyrosine phosphatase, receptor type, C [Source:HGNC Symbol;Acc:9666]
Gene Synonyms
B220, CD45, CD45R, GP180, L-CA, LCA, LY5, T200
Location
Chromosome 1: 198,607,801-198,726,545 forward strand.
GRCh37:CM000663.1
View alleles of this gene on alternative sequences
About this gene
This gene has 18 transcripts (splice variants), 1 gene allele, 163 orthologues, 35 paralogues and is associated with 65 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000442510.2 | PTPRC-001 | 5164 | 1306aa | ENSP00000411355.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1397 | M9MML3 Q6LDN6 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 Q6QIR3 Q9H3X6 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000367376.2 | PTPRC-202 | 5321 | 1304aa | ENSP00000356346.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P08575 Q6LDN6 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 Q6QIR3 Q9H3X6 | NM_002838.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000352140.3 | PTPRC-201 | 5177 | 1256aa | ENSP00000193532.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PC28 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 Q6QIR3 Q9H3X6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000594404.1 | PTPRC-203 | 4838 | 1143aa | ENSP00000471843.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P08575 Q6QIM3 Q6QIN1 Q6QIN9 | NM_080921.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000348564.6 | PTPRC-002 | 4626 | 1145aa | ENSP00000306782.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1398 | M9MMK9 Q6QIM3 Q6QIN1 Q6QIN9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000367367.4 | PTPRC-005 | 2291 | 735aa | ENSP00000356337.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M3ZCP1 Q6LDN6 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000530727.1 | PTPRC-006 | 1962 | 600aa | ENSP00000433536.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKH0 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413409.2 | PTPRC-009 | 1338 | 87aa | ENSP00000405494.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44291 | M9MML4 | NM_001267798.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000598951.1 | PTPRC-204 | 1098 | 34aa | ENSP00000471810.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0VAE8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000367364.1 | PTPRC-004 | 1017 | 36aa | ENSP00000356334.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9MMK8 Q0VAE8 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000367379.1 | PTPRC-011 | 517 | 148aa | ENSP00000356349.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9MMK9 Q6QIN1 Q6QIN9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000418674.1 | PTPRC-003 | 462 | 118aa | ENSP00000393360.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9MML3 Q6QIR3 Q9H3X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529828.1 | PTPRC-010 | 2336 | 753aa | ENSP00000469141.1 | Non stop decay | M9MML3 Q6QIM3 Q6QIN1 Q6QIN9 Q6QIQ5 Q6QIR3 Q9H3X6 | - | - | |
| ENST00000391970.3 | PTPRC-014 | 408 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000427110.2 | PTPRC-013 | 264 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462363.2 | PTPRC-007 | 926 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491302.1 | PTPRC-008 | 648 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484135.1 | PTPRC-012 | 612 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
