Gene: KDM5A ENSG00000073614

Description

lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886]

Gene Synonyms

JARID1A, RBBP-2, RBBP2, RBP2

Location

Chromosome 12: 389,295-498,620 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 12 transcripts (splice variants), 223 orthologues, 10 paralogues and is associated with 67 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399788.2	KDM5A-001	10763	1690aa	ENSP00000382688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41736	P29375	NM_001042603.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000382815.4	KDM5A-201	5274	1636aa	ENSP00000372265.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1F7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544760.1	KDM5A-012	2338	715aa	ENSP00000440622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EV89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000543507.1	KDM5A-009	575	131aa	ENSP00000444251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZR8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536014.1	KDM5A-010	558	122aa	ENSP00000438203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H322	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535014.1	KDM5A-011	551	126aa	ENSP00000443854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ99	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540838.1	KDM5A-003	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544777.1	KDM5A-008	670	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540168.1	KDM5A-007	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540156.1	KDM5A-004	516	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535269.1	KDM5A-005	401	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541335.1	KDM5A-006	378	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: KDM5A ENSG00000073614

Summary