Human (GRCh37.p13)
Description

lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886]

Gene Synonyms

JARID1A, RBBP-2, RBBP2, RBP2

Location

Chromosome 12: 389,295-498,620 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 12 transcripts (splice variants), 4 paralogues and is associated with 67 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000399788.2KDM5A-001107631690aa
 
Protein coding
CCDS41736P29375 NM_001042603.1Ensembl CanonicalGENCODE Basic
ENST00000382815.4KDM5A-20152741636aa
 
Protein coding
F5H1F7 -GENCODE Basic
ENST00000544760.1KDM5A-0122338715aa
 
Protein coding
E7EV89 -CDS 3' incomplete
ENST00000543507.1KDM5A-009575131aa
 
Protein coding
F5GZR8 -CDS 3' incomplete
ENST00000536014.1KDM5A-010558122aa
 
Protein coding
F5H322 -CDS 3' incomplete
ENST00000535014.1KDM5A-011551126aa
 
Protein coding
F5GZ99 -CDS 3' incomplete
ENST00000540838.1KDM5A-003456No protein
 
Processed transcript
---
ENST00000544777.1KDM5A-008670No protein
 
Retained intron
---
ENST00000540168.1KDM5A-007523No protein
 
Retained intron
---
ENST00000540156.1KDM5A-004516No protein
 
Retained intron
---
ENST00000535269.1KDM5A-005401No protein
 
Retained intron
---
ENST00000541335.1KDM5A-006378No protein
 
Retained intron
---
Name

KDM5A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: P29375

CCDS

This gene is a member of the Human CCDS set: CCDS41736.1

Ensembl version

ENSG00000073614.7

Other assemblies

This gene maps to 280,129-389,454 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000168055 (version 1)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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