Description
programmed cell death 2 [Source:HGNC Symbol;Acc:8762]
Gene Synonyms
RP8, ZMYND7
Location
Chromosome 6: 170,884,383-170,893,780 reverse strand.
GRCh37:CM000668.1
About this gene
This gene has 14 transcripts (splice variants), 190 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000541970.1 | PDCD2-001 | 3378 | 344aa | ENSP00000439467.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5316 | F5H739 Q16342 | NM_002598.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000453163.2 | PDCD2-002 | 2657 | 228aa | ENSP00000402524.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47521 | E9PCU7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000443345.2 | PDCD2-004 | 1897 | 195aa | ENSP00000397272.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56460 | Q16342 | NM_144781.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537445.1 | PDCD2-005 | 1114 | 188aa | ENSP00000440572.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56462 | F5GYS7 | NM_001199464.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542896.1 | PDCD2-006 | 1082 | 298aa | ENSP00000439914.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4V9 F5H739 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000392090.2 | PDCD2-007 | 936 | 311aa | ENSP00000375940.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS56461 | F5H739 Q16342 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000538195.1 | PDCD2-014 | 560 | 21aa | ENSP00000442815.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H739 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000544336.1 | PDCD2-003 | 1164 | 99aa | ENSP00000444066.1 | Nonsense mediated decay | F5GWT2 H0YFM2 H0YFZ5 | - | - | |
| ENST00000167218.5 | PDCD2-009 | 1118 | 221aa | ENSP00000167218.5 | Nonsense mediated decay | J3QK82 | - | - | |
| ENST00000545869.1 | PDCD2-010 | 900 | 99aa | ENSP00000441977.1 | Nonsense mediated decay | F5GWT2 H0YFM2 H0YFZ5 | - | - | |
| ENST00000544866.1 | PDCD2-012 | 710 | 35aa | ENSP00000441098.1 | Nonsense mediated decay | H0YFZ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000544755.1 | PDCD2-013 | 582 | 46aa | ENSP00000440117.1 | Nonsense mediated decay | H0YFM2 H0YFZ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000539212.1 | PDCD2-011 | 445 | 40aa | ENSP00000439236.1 | Nonsense mediated decay | H0YFM2 H0YFZ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000543284.1 | PDCD2-008 | 3255 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
