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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: C16orf80 ENSG00000070761

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Description

chromosome 16 open reading frame 80 [Source:HGNC Symbol;Acc:29523]

Gene Synonyms

EVORF, GTL3, fSAP23

Location

Chromosome 16: 58,147,496-58,163,354 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 7 transcripts (splice variants), 227 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262498.3	C16orf80-001	1350	193aa	ENSP00000262498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10793	Q9Y6A4	NM_013242.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565880.1	C16orf80-007	572	108aa	ENSP00000455220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPA3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562443.1	C16orf80-006	276	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562622.1	C16orf80-002	1605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567660.1	C16orf80-003	731	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567092.1	C16orf80-004	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564150.1	C16orf80-005	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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