Description
poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554]
Gene Synonyms
PAB1, PABP, PABP1, PABPC2, PABPL1
Location
Chromosome 8: 101,698,044-101,735,037 reverse strand.
GRCh37:CM000670.1
About this gene
This gene has 23 transcripts (splice variants), 12 paralogues and is associated with 56 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000318607.5 | PABPC1-001 | 3485 | 636aa | ENSP00000313007.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6289 | E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 H0YB75 P11940 | NM_002568.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000519004.1 | PABPC1-002 | 2401 | 591aa | ENSP00000429594.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGH3 E7EQV3 H0YB75 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000522387.1 | PABPC1-003 | 2331 | 604aa | ENSP00000429395.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD8 E5RGC4 E5RHG7 E5RJM8 E7ERJ7 H0YB75 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000520868.1 | PABPC1-006 | 971 | 169aa | ENSP00000428021.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519100.1 | PABPC1-012 | 851 | 284aa | ENSP00000427914.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000520142.1 | PABPC1-008 | 754 | 118aa | ENSP00000430012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD8 E5RGC4 E5RH24 E5RHG7 E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522658.1 | PABPC1-005 | 736 | 183aa | ENSP00000428840.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YB75 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000518196.1 | PABPC1-020 | 631 | 108aa | ENSP00000430159.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGH3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521865.1 | PABPC1-015 | 628 | 129aa | ENSP00000429119.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD8 E5RGC4 E5RH24 E5RHG7 E5RJB9 E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000518293.1 | PABPC1-021 | 608 | 42aa | ENSP00000430716.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000522720.1 | PABPC1-017 | 593 | 75aa | ENSP00000429790.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD8 E5RGC4 E5RHG7 E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000517403.1 | PABPC1-007 | 560 | 187aa | ENSP00000428190.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000523555.1 | PABPC1-009 | 522 | 174aa | ENSP00000429892.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000520804.1 | PABPC1-018 | 493 | 43aa | ENSP00000428749.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGC4 E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521067.1 | PABPC1-016 | 492 | 61aa | ENSP00000428937.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RFD8 E5RGC4 E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000517990.1 | PABPC1-025 | 487 | 136aa | ENSP00000428030.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YAS7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519363.1 | PABPC1-019 | 453 | 38aa | ENSP00000429032.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RJM8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000523636.1 | PABPC1-014 | 818 | 165aa | ENSP00000428948.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519622.1 | PABPC1-024 | 667 | 131aa | ENSP00000427805.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000519596.1 | PABPC1-013 | 771 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000517921.1 | PABPC1-010 | 885 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000518716.1 | PABPC1-022 | 694 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000519848.1 | PABPC1-023 | 676 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
