Description
regulatory factor X-associated ankyrin-containing protein [Source:HGNC Symbol;Acc:9987]
Gene Synonyms
ANKRA1, BLS, F14150_1, MGC138628, RFX-B, RFXB
Location
Chromosome 19: 19,303,008-19,312,678 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 16 transcripts (splice variants), 187 orthologues, 3 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000303088.4 | RFXANK-001 | 1407 | 260aa | ENSP00000305071.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12395 | F5H7D2 O14593 | NM_003721.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000353145.1 | RFXANK-201 | 1369 | 237aa | ENSP00000262804.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12396 | O14593 | NM_134440.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000456252.3 | RFXANK-002 | 1325 | 238aa | ENSP00000409138.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS62611 | F5GY33 F5H7D2 Q24JQ1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000407360.3 | RFXANK-003 | 1212 | 260aa | ENSP00000384572.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12395 | F5H7D2 O14593 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000392324.4 | RFXANK-004 | 1059 | 237aa | ENSP00000376138.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12396 | O14593 | NM_001278728.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000593273.1 | RFXANK-017 | 865 | 145aa | ENSP00000466913.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENE6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000421262.3 | RFXANK-005 | 856 | 83aa | ENSP00000393159.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7D2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540981.1 | RFXANK-008 | 832 | 188aa | ENSP00000440325.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GY33 F5H7D2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000535017.1 | RFXANK-012 | 546 | 182aa | ENSP00000444280.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YGQ6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000536253.1 | RFXANK-014 | 374 | 41aa | ENSP00000440321.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YFU5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000544923.1 | RFXANK-015 | 288 | 47aa | ENSP00000441042.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YFZ0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000541873.2 | RFXANK-016 | 1002 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000543157.3 | RFXANK-006 | 919 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000545522.2 | RFXANK-010 | 888 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000543118.1 | RFXANK-011 | 422 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000540977.1 | RFXANK-013 | 389 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
