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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SPO11 ENSG00000054796

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Description

SPO11 meiotic protein covalently bound to DSB [Source:HGNC Symbol;Acc:11250]

Gene Synonyms

CT35, SPATA43, TOPVIA

Location

Chromosome 20: 55,904,815-55,919,050 forward strand.

GRCh37:CM000682.1

About this gene

This gene has 5 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371263.3	SPO11-001	1834	396aa	ENSP00000360310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13456	Q9Y5K1	NM_012444.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000345868.4	SPO11-002	1666	358aa	ENSP00000316034.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13457	Q9Y5K1	NM_198265.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371260.4	SPO11-003	1608	354aa	ENSP00000360307.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCH7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000418127.1	SPO11-004	810	270aa	ENSP00000413185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCH6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000494972.1	SPO11-005	1133	123aa	ENSP00000431842.1	Nonsense mediated decay		H0YCK9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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