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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOMER3 ENSG00000051128

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Description

homer homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:17514]

Gene Synonyms

HOMER-3, VESL3

Location

Chromosome 19: 19,040,010-19,052,070 reverse strand.

GRCh37:CM000681.1

About this gene

This gene has 13 transcripts (splice variants), 276 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539827.1	HOMER3-004	1979	361aa	ENSP00000439937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12391	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542541.2	HOMER3-005	1607	361aa	ENSP00000446026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12391	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	NM_001145722.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392351.3	HOMER3-001	1557	361aa	ENSP00000376162.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12391	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	NM_004838.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000433218.2	HOMER3-202	1418	358aa	ENSP00000396154.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46023	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	NM_001145721.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000221222.11	HOMER3-002	1384	358aa	ENSP00000221222.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46023	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	NM_001145724.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000355887.6	HOMER3-201	1284	358aa	ENSP00000348150.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46023	M0QZN1 M0R2T8 M0R2U7 Q9NSC5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594439.1	HOMER3-003	982	325aa	ENSP00000471835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46022	M0R2T8 Q9NSC5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000594794.1	HOMER3-006	903	152aa	ENSP00000469800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYF9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000596482.1	HOMER3-010	866	243aa	ENSP00000472815.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZN1 M0R2T8 M0R2U7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599097.1	HOMER3-007	770	85aa	ENSP00000472800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2T8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600077.1	HOMER3-008	675	150aa	ENSP00000470659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QZN1 M0R2T8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000595756.1	HOMER3-011	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599808.1	HOMER3-009	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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