Description
pentatricopeptide repeat domain 2 [Source:HGNC Symbol;Acc:25734]
Gene Synonyms
FLJ12598
Location
Chromosome 5: 71,616,194-71,656,052 forward strand.
GRCh37:CM000667.1
About this gene
This gene has 12 transcripts (splice variants) and 198 orthologues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000380639.5 | PTCD2-001 | 2051 | 388aa | ENSP00000370013.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4014 | B3KPU6 D6RGK0 Q8WV60 | NM_024754.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000503868.1 | PTCD2-006 | 1653 | 279aa | ENSP00000427349.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS68891 | E9PFV7 | NM_001284403.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000536805.1 | PTCD2-201 | 1440 | 216aa | ENSP00000444772.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS68892 | B7Z8L7 | NM_001284404.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000510676.2 | PTCD2-011 | 1001 | 203aa | ENSP00000426295.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RGK0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000543322.1 | PTCD2-202 | 894 | 161aa | ENSP00000438810.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z8R2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000486995.1 | PTCD2-002 | 2648 | 74aa | ENSP00000425606.1 | Nonsense mediated decay | D6RJH8 | - | - | |
| ENST00000308077.5 | PTCD2-003 | 2195 | 388aa | ENSP00000308948.5 | Nonsense mediated decay | CCDS4014 | B3KPU6 D6RGK0 Q8WV60 | - | - |
| ENST00000503315.1 | PTCD2-007 | 1440 | 143aa | ENSP00000425773.1 | Nonsense mediated decay | D6RIZ0 | - | - | |
| ENST00000515198.1 | PTCD2-008 | 881 | 161aa | ENSP00000427524.1 | Nonsense mediated decay | B7Z8R2 | - | - | |
| ENST00000511752.1 | PTCD2-010 | 569 | 93aa | ENSP00000429665.1 | Nonsense mediated decay | E5RHU2 | - | - | |
| ENST00000460837.2 | PTCD2-004 | 1266 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493283.1 | PTCD2-005 | 744 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
