Description
remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:18118]
Gene Synonyms
HBXAP, RSF-1, XAP8, p325
Location
Chromosome 11: 77,371,041-77,532,063 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 13 transcripts (splice variants), 257 orthologues and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000308488.6 | RSF1-001 | 11550 | 1441aa | ENSP00000311513.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8253 | H0YCN2 H0YDG9 H0YER1 Q96T23 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000480887.1 | RSF1-003 | 5318 | 1189aa | ENSP00000434509.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YDG9 Q96T23 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000360355.2 | RSF1-201 | 5040 | 1410aa | ENSP00000353511.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCN2 H0YDG9 Q96T23 | NM_016578.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526324.1 | RSF1-006 | 2409 | 803aa | ENSP00000432022.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YCN2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000528095.1 | RSF1-005 | 2107 | 702aa | ENSP00000436408.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YER1 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000531026.1 | RSF1-007 | 830 | 276aa | ENSP00000433603.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YDG9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000440064.2 | RSF1-004 | 604 | 202aa | ENSP00000408844.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000532556.1 | RSF1-010 | 495 | 165aa | ENSP00000436728.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000530604.1 | RSF1-008 | 520 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000534794.1 | RSF1-009 | 487 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467567.1 | RSF1-002 | 2982 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531768.1 | RSF1-011 | 626 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529470.1 | RSF1-012 | 448 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
