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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BARX2 ENSG00000043039

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Description

BARX homeobox 2 [Source:HGNC Symbol;Acc:956]

Location

Chromosome 11: 129,245,835-129,322,171 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281437.4	BARX2-001	1810	279aa	ENSP00000281437.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8481	G3V397 Q9UMQ3	NM_003658.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526127.1	BARX2-002	1616	134aa	ENSP00000451113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V397	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000531946.1	BARX2-003	1358	157aa	ENSP00000450418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V222	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000605151.1	BARX2-004	2148	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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