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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SKIV2L2 ENSG00000039123

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Description

superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:18734]

Gene Synonyms

Dob1, KIAA0052, Mtr4, fSAP118

Location

Chromosome 5: 54,603,588-54,721,409 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 10 transcripts (splice variants), 210 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000230640.5	SKIV2L2-001	4192	1042aa	ENSP00000230640.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3967	P42285	NM_015360.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545714.1	SKIV2L2-201	3271	941aa	ENSP00000442583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7E2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508716.1	SKIV2L2-003	2185	72aa	ENSP00000426641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000506750.1	SKIV2L2-002	3271	89aa	ENSP00000425042.1	Nonsense mediated decay		D6REC7	-	-
ENST00000505565.1	SKIV2L2-007	695	88aa	ENSP00000422125.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504388.1	SKIV2L2-004	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503165.1	SKIV2L2-006	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504997.1	SKIV2L2-005	500	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518955.1	SKIV2L2-009	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502953.1	SKIV2L2-008	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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