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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: DEPDC1B ENSG00000035499

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Description

DEP domain containing 1B [Source:HGNC Symbol;Acc:24902]

Gene Synonyms

BRCC3, XTP1, XTP8

Location

Chromosome 5: 59,892,739-59,996,017 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 7 transcripts (splice variants), 196 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265036.5	DEPDC1B-001	2499	529aa	ENSP00000265036.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3977	Q8WUY9	NM_018369.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545085.1	DEPDC1B-201	1596	440aa	ENSP00000438320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H072	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453022.2	DEPDC1B-002	1569	467aa	ENSP00000389101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47214	F5H072 Q8WUY9	NM_001145208.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000512078.1	DEPDC1B-003	1596	22aa	ENSP00000427527.1	Nonsense mediated decay		D6RIB0	-	-
ENST00000512452.1	DEPDC1B-005	661	36aa	ENSP00000426979.1	Nonsense mediated decay		D6RDV9	-	-
ENST00000509006.1	DEPDC1B-004	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505017.1	DEPDC1B-006	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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