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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRDM11 ENSG00000019485

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Description

PR domain containing 11 [Source:HGNC Symbol;Acc:13996]

Gene Synonyms

PFM8

Location

Chromosome 11: 45,115,564-45,247,734 forward strand.

GRCh37:CM000673.1

About this gene

This gene has 6 transcripts (splice variants), 199 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424263.2	PRDM11-002	1858	477aa	ENSP00000394314.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58130	E9PJ09 Q9NQV5	NM_001256696.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534751.2	PRDM11-005	3111	480aa	ENSP00000456942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000263765.4	PRDM11-201	2229	511aa	ENSP00000263765.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ09 Q9NQV5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530656.1	PRDM11-001	1536	511aa	ENSP00000435976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ09 Q9NQV5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000526442.1	PRDM11-004	762	184aa	ENSP00000431898.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528980.1	PRDM11-006	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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