Description
solute carrier family 25, member 39 [Source:HGNC Symbol;Acc:24279]
Gene Synonyms
CGI-69, CGI69, FLJ22407
Location
Chromosome 17: 42,396,993-42,402,238 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 17 transcripts (splice variants), 140 orthologues and 49 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000377095.5 | SLC25A39-006 | 1565 | 359aa | ENSP00000366299.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45700 | K7ELM7 K7EMW3 Q9BZJ4 | NM_001143780.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000225308.8 | SLC25A39-001 | 1607 | 351aa | ENSP00000225308.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11482 | K7EJI2 K7EKF4 K7EMW3 K7EQS4 Q9BZJ4 | NM_016016.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000590194.1 | SLC25A39-007 | 1542 | 351aa | ENSP00000467681.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11482 | K7EJI2 K7EKF4 K7EMW3 K7EQS4 Q9BZJ4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000537904.2 | SLC25A39-005 | 1274 | 336aa | ENSP00000444540.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DFG5 K7EMW3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000586016.1 | SLC25A39-008 | 1156 | 227aa | ENSP00000466676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMW3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000588049.1 | SLC25A39-012 | 839 | 164aa | ENSP00000465182.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DI93 K7EJI2 K7EKF4 K7EQS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592857.1 | SLC25A39-017 | 837 | 93aa | ENSP00000467956.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588767.1 | SLC25A39-015 | 807 | 266aa | ENSP00000466615.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EMR4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585523.1 | SLC25A39-009 | 574 | 72aa | ENSP00000466144.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELM7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586633.1 | SLC25A39-010 | 566 | 99aa | ENSP00000465594.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EKF4 K7EQS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585636.1 | SLC25A39-011 | 561 | 143aa | ENSP00000465554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EKC2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000593166.1 | SLC25A39-016 | 797 | 61aa | ENSP00000467964.1 | Nonsense mediated decay | K7EQS8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000591006.1 | SLC25A39-004 | 2217 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588315.1 | SLC25A39-002 | 1409 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585695.1 | SLC25A39-003 | 1121 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592372.1 | SLC25A39-014 | 867 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000591151.1 | SLC25A39-013 | 636 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
