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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TSPAN9 ENSG00000011105

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Description

tetraspanin 9 [Source:HGNC Symbol;Acc:21640]

Gene Synonyms

NET-5, NET5, PP1057

Location

Chromosome 12: 3,186,521-3,395,730 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 7 transcripts (splice variants), 271 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000011898.5	TSPAN9-001	4323	239aa	ENSP00000011898.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8520	O75954	NM_006675.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537971.1	TSPAN9-201	4284	239aa	ENSP00000444799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8520	O75954	NM_001168320.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407263.1	TSPAN9-003	958	271aa	ENSP00000384488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MD23	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000444315.2	TSPAN9-005	570	59aa	ENSP00000412908.2	Nonsense mediated decay		E9PHL0	-	-
ENST00000492305.1	TSPAN9-002	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000431374.2	TSPAN9-006	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539631.1	TSPAN9-004	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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