Description
intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:24970]
Gene Synonyms
HOM-TES-103, IFFO
Location
Chromosome 12: 6,647,541-6,665,239 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 10 transcripts (splice variants), 269 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000356896.4 | IFFO1-011 | 2680 | 563aa | ENSP00000349364.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41741 | F8W8H2 Q0D2I5 Q9Y4M3 | NM_001193457.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000436152.2 | IFFO1-201 | 3101 | 256aa | ENSP00000390721.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DQQ1 F8W8H2 Q9Y4M3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000465801.1 | IFFO1-003 | 2850 | 255aa | ENSP00000436261.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPX7 Q9Y4M3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000336604.4 | IFFO1-001 | 2686 | 562aa | ENSP00000337593.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8550 | E9PPX7 Q0D2I5 Q9Y4M3 | NM_080730.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000396840.2 | IFFO1-008 | 2677 | 559aa | ENSP00000380052.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q0D2I5 Q9Y4M3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000487279.2 | IFFO1-007 | 2786 | 264aa | ENSP00000432493.2 | Nonsense mediated decay | Q0D2I5 | - | - | |
| ENST00000488007.1 | IFFO1-006 | 3001 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471408.1 | IFFO1-004 | 2843 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472558.2 | IFFO1-005 | 2571 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000396830.2 | IFFO1-010 | 1776 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
