Description
RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:14173]
Gene Synonyms
C16orf40, MGC19600, RLUCL
Location
Chromosome 16: 834,974-838,397 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 10 transcripts (splice variants), 199 orthologues and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000561734.1 | RPUSD1-004 | 2159 | 312aa | ENSP00000455026.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10426 | H3BQN8 H3BSG4 Q9UJJ7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000007264.2 | RPUSD1-001 | 2050 | 312aa | ENSP00000007264.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10426 | H3BQN8 H3BSG4 Q9UJJ7 | NM_058192.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000565809.1 | RPUSD1-002 | 1918 | 131aa | ENSP00000457722.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BUN6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000567114.1 | RPUSD1-003 | 1835 | 183aa | ENSP00000455862.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQN8 H3BSG4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000562070.1 | RPUSD1-010 | 954 | 178aa | ENSP00000458059.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000565377.1 | RPUSD1-005 | 940 | 173aa | ENSP00000456692.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BSG4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000569601.1 | RPUSD1-007 | 917 | 181aa | ENSP00000454616.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMZ6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563560.1 | RPUSD1-009 | 587 | 168aa | ENSP00000456231.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BRG3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567283.1 | RPUSD1-008 | 835 | 141aa | ENSP00000457527.1 | Nonsense mediated decay | H3BU91 | - | - | |
| ENST00000565503.1 | RPUSD1-006 | 561 | 97aa | ENSP00000456545.1 | Nonsense mediated decay | H3BS55 | - | - |
