Gene: SPATA20 ENSG00000006282

Description

spermatogenesis associated 20 [Source:HGNC Symbol;Acc:26125]

Gene Synonyms

FLJ21347, SSP411, Tisp78

Location

Chromosome 17: 48,620,419-48,633,213 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 26 transcripts (splice variants) and 190 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000006658.6	SPATA20-001	2719	802aa	ENSP00000006658.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11571	Q8TB22	NM_022827.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000393244.3	SPATA20-201	2702	742aa	ENSP00000376935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58564	Q8TB22	NM_001258373.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000356488.4	SPATA20-004	2634	786aa	ENSP00000348878.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58563	Q8TB22	NM_001258372.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000504334.1	SPATA20-002	3539	43aa	ENSP00000424215.1	Nonsense mediated decay		D6R947	-	-
ENST00000503127.1	SPATA20-003	2734	43aa	ENSP00000426228.1	Nonsense mediated decay		D6R947	-	-
ENST00000505559.1	SPATA20-005	1590	43aa	ENSP00000426025.1	Nonsense mediated decay		D6R947	-	-
ENST00000511347.1	SPATA20-020	1035	247aa	ENSP00000424538.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502911.1	SPATA20-010	879	56aa	ENSP00000422378.1	Nonsense mediated decay		D6RC70	-	-
ENST00000505456.2	SPATA20-014	878	43aa	ENSP00000426608.1	Nonsense mediated decay		D6R947	-	-
ENST00000505085.1	SPATA20-009	628	67aa	ENSP00000427374.1	Nonsense mediated decay		D6RIU6	-	-
ENST00000508528.1	SPATA20-024	512	110aa	ENSP00000425271.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510917.1	SPATA20-011	453	43aa	ENSP00000423643.1	Nonsense mediated decay		D6R947	-	-
ENST00000511937.1	SPATA20-006	2669	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503063.1	SPATA20-008	3232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512181.1	SPATA20-007	1456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505656.1	SPATA20-021	975	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504265.1	SPATA20-022	877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512416.1	SPATA20-019	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515619.1	SPATA20-023	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504271.1	SPATA20-012	806	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513618.1	SPATA20-025	629	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508598.1	SPATA20-015	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511605.1	SPATA20-013	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511845.1	SPATA20-017	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505336.1	SPATA20-018	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515526.1	SPATA20-016	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SPATA20 ENSG00000006282

Summary