Gene: UPF1 ENSG00000005007

Description

UPF1 regulator of nonsense transcripts homolog (yeast) [Source:HGNC Symbol;Acc:9962]

Gene Synonyms

HUPF1, KIAA0221, NORF1, RENT1, pNORF1, smg-2

Location

Chromosome 19: 18,942,747-18,979,045 forward strand.

GRCh37:CM000681.1

About this gene

This gene has 13 transcripts (splice variants), 5 paralogues and is associated with 2 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262803.5	UPF1-001	5348	1118aa	ENSP00000262803.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12386	B3KY55 Q92900	NM_002911.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000599848.1	UPF1-002	5311	1129aa	ENSP00000470142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY55 Q92900	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600310.1	UPF1-007	750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000598471.1	UPF1-008	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000600868.1	UPF1-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000594504.1	UPF1-003	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000601981.1	UPF1-011	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000598209.1	UPF1-006	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000600012.1	UPF1-005	501	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000596842.1	UPF1-012	3825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600689.1	UPF1-013	3084	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594243.1	UPF1-009	683	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601689.1	UPF1-010	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Recent locations

Gene: UPF1 ENSG00000005007

Summary