Ensembl

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: ACAN ENSG00000157766

.

Description

aggrecan [Source:HGNC Symbol;Acc:319]

Gene Synonyms

AGC1, AGCAN, CSPG1, CSPGCP, MSK16, SEDK

Location

Chromosome 15: 89,346,674-89,418,585 forward strand.

GRCh37:CM000677.1

About this gene

This gene has 8 transcripts (splice variants), 8 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ACAN-201	ENST00000439576.2	8840	2530aa	ENSP00000387356.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53970	E7EX88 Q6LE94	NM_013227 NP_037359	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ACAN-006	ENST00000561243.1	7593	2530aa	ENSP00000453342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53970	E7EX88 Q6LE94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ACAN-004	ENST00000352105.7	7526	2431aa	ENSP00000341615.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53971	E7ENV9	NM_001135 NP_001126	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ACAN-008	ENST00000559004.1	7628	2492aa	ENSP00000453499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	H0YM81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ACAN-001	ENST00000558207.1	4159	721aa	ENSP00000453003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q6PID9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ACAN-003	ENST00000558704.1	712	156aa	ENSP00000452682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ACAN-005	ENST00000560601.1	679	226aa	ENSP00000453581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	Q6LE94	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ACAN-002	ENST00000558604.1	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-	-

.

Summary

.

.

Gene-based displays