Gene: HLA-A ENSG00000235657

Description

major histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:4931]

Gene Synonyms

HLA-B59, HLA-DNA, HLA-DRB1, HLAA, HLAB, MICA

Location

Chromosome HSCHR6_MHC_DBB: 29,899,000-29,903,640 forward strand.

GRCh37:GL000252.1

View this gene on the primary assembly.

About this gene

This gene has 8 transcripts (splice variants), 1 gene allele and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000438861.2	HLA-A-002	1854	371aa	ENSP00000388526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BCQ4 A2BCQ5 A4UUL3 A8YQI5 B0BKZ4 B0LV24 B3V990 B6ECH5 B6VAW7 C5IZP1 C5IZR8 C6K4E0 C7FDP7 C9E1D2 C9WEK4 C9WEK6 C9WEK8 C9WEK9 C9WEL5 C9WEM5 C9WEM6 C9WEM9 D1MEQ2 D2DKX3 D2DKY0 D2DL15 D2DL17 D2DL18 D2DL20 D2KZ27 D3G9K0 D3JT98 D3U430 D3U448 D3U452 D3U472 D3U693 D3U696 D5FHG9 D5FHH7 D5FHI2 D5FHI5 D5FHJ1 D5FHJ3 D5FHJ4 D5FHJ5 D5FHK2 D5FHL3 D5FHL8 D5FHM6 D5FHN0 D5FHN9 D5FHP1 D5FHP6 D5FHR5 D5FHS2 D5FZI0 D5FZI4 D5FZI5 D5FZI8 D5G1Q5 D5G1Q8 D5G1Q9 D5G1R0 D5G236 D5G237 D5H3I6 D5H3T3 D5M8F4 D5M8G2 D6MJ85 D6MJB1 D6MJB3 D6MJC2 D6MJC3 D6MJD1 D6ML28 D6ML45 D7NNQ9 D7NP78 D7NP89 D7NP96 D7NPA4 D7NPL3 D7R8B1 D7RJ51 D9U3G4 D9U3G5 D9U3G6 E0WBX0 E0WBX5 E0WBY0 E0WBY1 E0WBY3 E0WBY4 E0WMV7 E0YTG7 E1U671 E1U674 E2D5L0 E2D5M8 E2GJD2 E3SWF8 E5D6K4 E5DCM3 E5G0Y4 E7BY92 E9LXY0 E9LXZ3 E9LXZ4 E9LY09 F0VRV9 F1CCR2 F1CCR5 F2VNF9 F2VNG3 F2VNG8 F2VNH6 F2VP54 F2VP70 F2X5X1 F2X5X3 F2X5Y6 F4YU05 F4YU06 F4YZT2 F6IB64 F6IB65 F6IQS1 F6IQS2 F6IQS3 F6IQS9 F6KRK0 F6KRL0 F6KRL2 F6KRN2 F6KRP3 F8R100 F8R109 F8R128 F8R132 F8R133 F8R8G4 F8R8I5 F8R8I8 F8RHD4 F8SKT2 F8SKT3 F8SKT4 F8SKU3 F8SKU5 G0KXH9 G0KXI5 G0W2J0 G0ZDS1 G0ZDS6 G0ZDS7 G0ZMG8 G0ZMH0 G1BEX2 G1DUW4 G1EMJ4 G1ENB4 G1ENB9 G1ENC9 G1END9 G1ENY0 G1EP04 G1EP11 G1EP30 G1EP35 G1EP38 G1EP39 G1EP54 G1EP76 G1EP86 G1EP87 G1EP91 G1EP92 G1EP94 G1EPA5 G1EPA6 G1EPA8 G1EPB0 G1EPF2 G1EPG8 G1EPG9 G1EPH1 G1EPH2 G1EPH3 G9HRP9 G9HW22 G9HW26 G9HW29 G9HW61 G9HW66 G9I2I9 G9I2J4 H2BDN7 H2BDP2 H2BDP9 H2BE85 H6UV71 H6V078 H9BB16 H9BNV4 H9BQ75 H9BQ77 H9C3I8 H9C5J5 I1V1X2 I1VXM3 I2GUK0 I3QHQ8 I3VZ03 I6M539 I6MHH0 I6NN64 I6NS53 I6QQT2 I6QU12 I6RCW7 I6SW68 I6ZTN5 I7APH3 I7HAR2 J7F4Z8 J7F565 J7F7A7 J7F7A8 J7F8I4 J9PVN7 J9PVN8 J9PW05 K0DCI9 K7P5B1 K7P5Y2 K7P622 K7P623 K9L8B8 M1F4C2 M1F4U3 M1F4U4 M1F4U5 M4N7T9 M9P8G4 M9P8G5 M9P8Q5 M9P8Y7 M9PA13 M9PAA5 M9PAJ8 M9PAL1 Q2HQJ5 Q2YHQ6 Q3BK09 Q4GX03 Q4LAU0 Q4QYZ9 Q50I06 Q53ZP1 Q540M3 Q546F7 Q546Q4 Q5W9R8 Q60I39 Q68Y63 Q70FC8 Q7YNX7 Q7YNX8 Q7YNY0 Q7YNY2 Q7YP23 Q7YP24 Q861A8 Q8SNB3 Q8WLS4 Q9GJ61 Q9GJP2 Q9MYA9 Q9MYF8 Q9TPQ5 Q9TPS0 Q9TPU2 Q9TQ80 Q9UQU2 R4I3G4 R4QQS6 R9WAS6 S0F0M8 T1R380 T2MJ84	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457879.1	HLA-A-001	1868	365aa	ENSP00000403575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BCQ4 A2BCQ5 A4UUL3 A8YQI5 B0BKZ4 B0LV24 B3V990 B6ECH5 B6VAW7 C5IZP1 C5IZR8 C6K4E0 C7FDP7 C9E1D2 C9WEK4 C9WEK6 C9WEK8 C9WEK9 C9WEL5 C9WEM5 C9WEM6 C9WEM9 D1MEQ2 D2DKX3 D2DKY0 D2DL15 D2DL17 D2DL18 D2DL20 D2KZ27 D3G9K0 D3JT98 D3U430 D3U448 D3U452 D3U472 D3U693 D3U696 D5FHG9 D5FHH7 D5FHI2 D5FHI5 D5FHJ1 D5FHJ3 D5FHJ4 D5FHJ5 D5FHK2 D5FHL3 D5FHL8 D5FHM6 D5FHN0 D5FHN9 D5FHP1 D5FHP6 D5FHR5 D5FHS2 D5FZI0 D5FZI4 D5FZI5 D5FZI8 D5G1Q5 D5G1Q8 D5G1Q9 D5G1R0 D5G236 D5G237 D5H3I6 D5H3T3 D5M8F4 D5M8G2 D6MJ85 D6MJB1 D6MJB3 D6MJC2 D6MJC3 D6MJD1 D6ML28 D6ML45 D7NNQ9 D7NP78 D7NP89 D7NP96 D7NPA4 D7NPL3 D7R8B1 D7RJ51 D9U3G4 D9U3G5 D9U3G6 E0WBX0 E0WBX5 E0WBY0 E0WBY1 E0WBY3 E0WBY4 E0WMV7 E0YTG7 E1U671 E1U674 E2D5L0 E2D5M8 E2GJD2 E3SWF8 E5D6K4 E5DCM3 E5G0Y4 E7BY92 E9LXY0 E9LXZ3 E9LXZ4 E9LY09 F0VRV9 F1CCR2 F1CCR5 F2VNF9 F2VNG3 F2VNG8 F2VNH6 F2VP54 F2VP70 F2X5X1 F2X5X3 F2X5Y6 F4YU05 F4YU06 F4YZT2 F6IB64 F6IB65 F6IQS1 F6IQS2 F6IQS3 F6IQS9 F6KRK0 F6KRL0 F6KRL2 F6KRN2 F6KRP3 F8R100 F8R109 F8R128 F8R132 F8R133 F8R8G4 F8R8I5 F8R8I8 F8RHD4 F8SKT2 F8SKT3 F8SKT4 F8SKU3 F8SKU5 G0KXH9 G0KXI5 G0W2J0 G0ZDS1 G0ZDS6 G0ZDS7 G0ZMG8 G0ZMH0 G1BEX2 G1DUW4 G1EMJ4 G1ENB4 G1ENB9 G1ENC9 G1END9 G1ENY0 G1EP04 G1EP11 G1EP30 G1EP35 G1EP38 G1EP39 G1EP54 G1EP76 G1EP86 G1EP87 G1EP91 G1EP92 G1EP94 G1EPA5 G1EPA6 G1EPA8 G1EPB0 G1EPF2 G1EPG8 G1EPG9 G1EPH1 G1EPH2 G1EPH3 G9HRP9 G9HW22 G9HW26 G9HW29 G9HW61 G9HW66 G9I2I9 G9I2J4 H2BDN7 H2BDP2 H2BDP9 H2BE85 H6UV71 H6V078 H9BB16 H9BNV4 H9BQ75 H9BQ77 H9C3I8 H9C5J5 I1V1X2 I1VXM3 I2GUK0 I3QHQ8 I3VZ03 I6M539 I6MHH0 I6NN64 I6NS53 I6QQT2 I6QU12 I6RCW7 I6SW68 I6ZTN5 I7APH3 I7HAR2 J7F4Z8 J7F565 J7F7A7 J7F7A8 J7F8I4 J9PVN7 J9PVN8 J9PW05 K0DCI9 K7P5B1 K7P5Y2 K7P622 K7P623 K9L8B8 M1F4C2 M1F4U3 M1F4U4 M1F4U5 M4N7T9 M9P8G4 M9P8G5 M9P8Q5 M9P8Y7 M9PA13 M9PAA5 M9PAJ8 M9PAL1 O78126 P01891 P01892 P10316 Q2HQJ5 Q2YHQ6 Q3BK09 Q4GX03 Q4LAU0 Q4QYZ9 Q50I06 Q53Z42 Q53ZP1 Q540M3 Q546F7 Q546Q4 Q5W9R8 Q60I39 Q68Y63 Q70FC8 Q7YNX7 Q7YNX8 Q7YNY0 Q7YNY2 Q7YP23 Q7YP24 Q861A8 Q861F7 Q8SNB3 Q8WLS4 Q9GJ61 Q9GJP2 Q9MYA9 Q9MYF8 Q9TPQ5 Q9TPS0 Q9TPU2 Q9TQ80 Q9UQU2 R4I3G4 R4QQS6 R9WAS6 S0F0M8 T1R380 T2MJ84	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000547271.1	HLA-A-212	1533	365aa	ENSP00000447962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BCQ4 A2BCQ5 A4UUL3 A8YQI5 B0BKZ4 B0LV24 B3V990 B6ECH5 B6VAW7 C5IZP1 C5IZR8 C6K4E0 C7FDP7 C9E1D2 C9WEK4 C9WEK6 C9WEK8 C9WEK9 C9WEL5 C9WEM5 C9WEM6 C9WEM9 D1MEQ2 D2DKX3 D2DKY0 D2DL15 D2DL17 D2DL18 D2DL20 D2KZ27 D3G9K0 D3JT98 D3U430 D3U448 D3U452 D3U472 D3U693 D3U696 D5FHG9 D5FHH7 D5FHI2 D5FHI5 D5FHJ1 D5FHJ3 D5FHJ4 D5FHJ5 D5FHK2 D5FHL3 D5FHL8 D5FHM6 D5FHN0 D5FHN9 D5FHP1 D5FHP6 D5FHR5 D5FHS2 D5FZI0 D5FZI4 D5FZI5 D5FZI8 D5G1Q5 D5G1Q8 D5G1Q9 D5G1R0 D5G236 D5G237 D5H3I6 D5H3T3 D5M8F4 D5M8G2 D6MJ85 D6MJB1 D6MJB3 D6MJC2 D6MJC3 D6MJD1 D6ML28 D6ML45 D7NNQ9 D7NP78 D7NP89 D7NP96 D7NPA4 D7NPL3 D7R8B1 D7RJ51 D9U3G4 D9U3G5 D9U3G6 E0WBX0 E0WBX5 E0WBY0 E0WBY1 E0WBY3 E0WBY4 E0WMV7 E0YTG7 E1U671 E1U674 E2D5L0 E2D5M8 E2GJD2 E3SWF8 E5D6K4 E5DCM3 E5G0Y4 E7BY92 E9LXY0 E9LXZ3 E9LXZ4 E9LY09 F0VRV9 F1CCR2 F1CCR5 F2VNF9 F2VNG3 F2VNG8 F2VNH6 F2VP54 F2VP70 F2X5X1 F2X5X3 F2X5Y6 F4YU05 F4YU06 F4YZT2 F6IB64 F6IB65 F6IQS1 F6IQS2 F6IQS3 F6IQS9 F6KRK0 F6KRL0 F6KRL2 F6KRN2 F6KRP3 F8R100 F8R109 F8R128 F8R132 F8R133 F8R8G4 F8R8I5 F8R8I8 F8RHD4 F8SKT2 F8SKT3 F8SKT4 F8SKU3 F8SKU5 G0KXH9 G0KXI5 G0W2J0 G0ZDS1 G0ZDS6 G0ZDS7 G0ZMG8 G0ZMH0 G1BEX2 G1DUW4 G1EMJ4 G1ENB4 G1ENB9 G1ENC9 G1END9 G1ENY0 G1EP04 G1EP11 G1EP30 G1EP35 G1EP38 G1EP39 G1EP54 G1EP76 G1EP86 G1EP87 G1EP91 G1EP92 G1EP94 G1EPA5 G1EPA6 G1EPA8 G1EPB0 G1EPF2 G1EPG8 G1EPG9 G1EPH1 G1EPH2 G1EPH3 G9HRP9 G9HW22 G9HW26 G9HW29 G9HW61 G9HW66 G9I2I9 G9I2J4 H2BDN7 H2BDP2 H2BDP9 H2BE85 H6UV71 H6V078 H9BB16 H9BNV4 H9BQ75 H9BQ77 H9C3I8 H9C5J5 I1V1X2 I1VXM3 I2GUK0 I3QHQ8 I3VZ03 I6M539 I6MHH0 I6NN64 I6NS53 I6QQT2 I6QU12 I6RCW7 I6SW68 I6ZTN5 I7APH3 I7HAR2 J7F4Z8 J7F565 J7F7A7 J7F7A8 J7F8I4 J9PVN7 J9PVN8 J9PW05 K0DCI9 K7P5B1 K7P5Y2 K7P622 K7P623 K9L8B8 M1F4C2 M1F4U3 M1F4U4 M1F4U5 M4N7T9 M9P8G4 M9P8G5 M9P8Q5 M9P8Y7 M9PA13 M9PAA5 M9PAJ8 M9PAL1 O78126 P01892 Q2HQJ5 Q2YHQ6 Q3BK09 Q4GX03 Q4LAU0 Q4QYZ9 Q50I06 Q53Z42 Q53ZP1 Q540M3 Q546F7 Q546Q4 Q5W9R8 Q60I39 Q68Y63 Q70FC8 Q7YNX7 Q7YNX8 Q7YNY0 Q7YNY2 Q7YP23 Q7YP24 Q861A8 Q861F7 Q8SNB3 Q8WLS4 Q9GJ61 Q9GJP2 Q9MYA9 Q9MYF8 Q9TPQ5 Q9TPS0 Q9TPU2 Q9TQ80 Q9UQU2 R4I3G4 R4QQS6 R9WAS6 S0F0M8 T1R380 T2MJ84	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453975.1	HLA-A-003	1334	299aa	ENSP00000392547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BCQ4 A2BCQ5 A4UUL3 A8YQI5 B0LV24 B3V990 B6ECH5 B6VAW7 C5IZP1 C5IZR8 C6K4E0 C7FDP7 C9E1D2 C9WEK4 C9WEK6 C9WEK8 C9WEK9 C9WEL5 C9WEM5 C9WEM6 C9WEM9 D1MEQ2 D2DKX3 D2DKY0 D2DL15 D2DL17 D2DL18 D2DL20 D2KZ27 D3G9K0 D3JT98 D3U430 D3U448 D3U452 D3U472 D3U693 D3U696 D5FHG9 D5FHH7 D5FHI2 D5FHI5 D5FHJ1 D5FHJ3 D5FHJ4 D5FHJ5 D5FHK2 D5FHL3 D5FHL8 D5FHM6 D5FHN0 D5FHN9 D5FHP1 D5FHP6 D5FHR5 D5FHS2 D5FZI0 D5FZI4 D5FZI5 D5FZI8 D5G1Q5 D5G1Q8 D5G1Q9 D5G1R0 D5G236 D5G237 D5H3I6 D5H3T3 D5M8F4 D5M8G2 D6MJ85 D6MJB1 D6MJB3 D6MJC2 D6MJC3 D6MJD1 D6ML28 D6ML45 D7NNQ9 D7NP78 D7NP89 D7NP96 D7NPA4 D7NPL3 D7R8B1 D7RJ51 D9U3G4 D9U3G5 D9U3G6 E0WBX0 E0WBX5 E0WBY0 E0WBY1 E0WBY3 E0WBY4 E0WMV7 E0YTG7 E1U671 E1U674 E2D5L0 E2D5M8 E2GJD2 E3SWF8 E5D6K4 E5DCM3 E5G0Y4 E7BY92 E9LXY0 E9LXZ3 E9LXZ4 E9LY09 F0VRV9 F1CCR2 F1CCR5 F2VNF9 F2VNG3 F2VNG8 F2VNH6 F2VP54 F2VP70 F2X5X1 F2X5X3 F2X5Y6 F4YU05 F4YU06 F4YZT2 F6IB64 F6IB65 F6KRK0 F6KRL0 F6KRL2 F6KRN2 F6KRP3 F8R100 F8R109 F8R128 F8R132 F8R133 F8R8G4 F8R8I5 F8R8I8 F8RHD4 F8SKT2 F8SKT3 F8SKT4 F8SKU3 F8SKU5 G0KXH9 G0KXI5 G0W2J0 G0ZDS1 G0ZDS6 G0ZDS7 G0ZMG8 G0ZMH0 G1BEX2 G1DUW4 G1EMJ4 G1ENB4 G1ENB9 G1ENC9 G1END9 G1ENY0 G1EP04 G1EP11 G1EP30 G1EP35 G1EP38 G1EP39 G1EP54 G1EP76 G1EP86 G1EP87 G1EP91 G1EP92 G1EP94 G1EPA5 G1EPA6 G1EPA8 G1EPB0 G1EPF2 G1EPG8 G1EPG9 G1EPH1 G1EPH2 G1EPH3 G9HRP9 G9HW22 G9HW26 G9HW29 G9HW61 G9HW66 G9I2I9 G9I2J4 H2BDN7 H2BDP2 H2BDP9 H2BE85 H6UV71 H6V078 H9BB16 H9BNV4 H9BQ75 H9BQ77 H9C3I8 H9C5J5 I1V1X2 I1VXM3 I2GUK0 I3QHQ8 I3VZ03 I6M539 I6MHH0 I6NN64 I6NS53 I6QQT2 I6QU12 I6RCW7 I6SW68 I6ZTN5 I7APH3 I7HAR2 J7F4Z8 J7F565 J7F7A7 J7F7A8 J7F8I4 J9PVN7 J9PVN8 J9PW05 K0DCI9 K7P5B1 K7P5Y2 K7P622 K7P623 K9L8B8 M1F4C2 M1F4U3 M1F4U4 M1F4U5 M4N7T9 M9P8G4 M9P8G5 M9P8Q5 M9P8Y7 M9PA13 M9PAA5 M9PAJ8 M9PAL1 Q2HQJ5 Q2YHQ6 Q3BK09 Q4GX03 Q4LAU0 Q4QYZ9 Q50I06 Q53ZP1 Q540M3 Q546F7 Q546Q4 Q5W9R8 Q60I39 Q68Y63 Q70FC8 Q7YNX7 Q7YNX8 Q7YNY0 Q7YNY2 Q7YP23 Q7YP24 Q861A8 Q8SNB3 Q9GJ61 Q9GJP2 Q9MYA9 Q9MYF8 Q9TPQ5 Q9TPS0 Q9TPU2 Q9TQ80 Q9UQU2 R4I3G4 R4QQS6 R9WAS6 S0F0M8 T1R380 T2MJ84	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468666.1	HLA-A-004	1782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000487534.1	HLA-A-005	1766	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000470534.1	HLA-A-007	1352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000460542.1	HLA-A-006	1334	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

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Gene: HLA-A ENSG00000235657

Summary