Description
tetraspanin 4 [Source:HGNC Symbol;Acc:11859]
Gene Synonyms
NAG-2, NAG2, TETRASPAN, TM4SF7, TSPAN-4
Location
Chromosome 11: 842,808-867,116 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 20 transcripts (splice variants), 202 orthologues and 32 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397404.1 | TSPAN4-202 | 1462 | 238aa | ENSP00000380553.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | NM_001025237.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397408.1 | TSPAN4-204 | 1430 | 238aa | ENSP00000380555.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | NM_001025236.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397406.1 | TSPAN4-203 | 1426 | 238aa | ENSP00000380554.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | NM_001025234.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397397.2 | TSPAN4-001 | 1423 | 238aa | ENSP00000380552.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | NM_003271.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409531.1 | TSPAN4-005 | 1339 | 257aa | ENSP00000386899.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8MVV6 E9PMX4 E9PPX8 E9PSH3 J3KQ42 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000397396.1 | TSPAN4-201 | 1332 | 174aa | ENSP00000380551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41589 | A8MVV6 E9PSH3 | NM_001025239.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000409543.2 | TSPAN4-007 | 1031 | 238aa | ENSP00000386513.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000397411.2 | TSPAN4-006 | 1025 | 238aa | ENSP00000380558.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7721 | A8MVV6 E9PMX4 E9PPX8 E9PSH3 O14817 | NM_001025238.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000527644.1 | TSPAN4-010 | 968 | 159aa | ENSP00000436260.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMX4 E9PPX8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000346501.4 | TSPAN4-017 | 882 | 204aa | ENSP00000324304.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMX4 J3KNL1 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000525334.1 | TSPAN4-016 | 860 | 100aa | ENSP00000433980.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PSH3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525201.1 | TSPAN4-015 | 834 | 174aa | ENSP00000431943.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41589 | A8MVV6 E9PSH3 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000530404.1 | TSPAN4-011 | 818 | 85aa | ENSP00000437266.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532375.1 | TSPAN4-018 | 518 | 132aa | ENSP00000434818.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PN41 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000468468.1 | TSPAN4-003 | 2777 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464987.1 | TSPAN4-002 | 2205 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494815.1 | TSPAN4-004 | 2187 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529566.1 | TSPAN4-014 | 706 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526055.1 | TSPAN4-013 | 469 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000524895.1 | TSPAN4-012 | 401 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
