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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX9 ENSG00000198807

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Description

paired box 9 [Source:HGNC Symbol;Acc:8623]

Gene Synonyms

PAX9, STHAG3

Location

Chromosome 14: 37,126,773-37,148,920 forward strand.

GRCh37:CM000676.1

About this gene

This gene has 6 transcripts (splice variants), 8 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361487.6	PAX9-001	4514	341aa	ENSP00000355245.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9662	E9KY40 P55771 Q2L4T1 Q7Z4A7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402703.2	PAX9-201	3102	341aa	ENSP00000384817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9662	E9KY40 P55771 Q2L4T1 Q7Z4A7	NM_006194.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554201.1	PAX9-002	1289	96aa	ENSP00000450434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V233	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557107.1	PAX9-003	995	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553267.1	PAX9-004	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555639.1	PAX9-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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