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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AFAP1 ENSG00000196526

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Description

actin filament associated protein 1 [Source:HGNC Symbol;Acc:24017]

Gene Synonyms

AFAP, AFAP-110, AFAP110

Location

Chromosome 4: 7,760,441-7,941,653 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 8 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000420658.1	AFAP1-202	7768	814aa	ENSP00000410689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47010	Q8N556	NM_001134647.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358461.2	AFAP1-201	7516	730aa	ENSP00000351245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3397	Q8N556	NM_198595.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360265.4	AFAP1-001	7479	730aa	ENSP00000353402.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3397	Q8N556	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382543.3	AFAP1-002	2590	814aa	ENSP00000371983.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47010	Q8N556	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513842.1	AFAP1-003	1638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513856.1	AFAP1-005	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508415.1	AFAP1-006	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505447.1	AFAP1-004	1517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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