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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SCFD2 ENSG00000184178

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Description

sec1 family domain containing 2 [Source:HGNC Symbol;Acc:30676]

Gene Synonyms

FLJ39514, STXBP1L1

Location

Chromosome 4: 53,739,149-54,232,242 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 3 transcripts (splice variants), 231 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000401642.3	SCFD2-001	3176	684aa	ENSP00000384182.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33984	D6RCK6 Q8WU76	NM_152540.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000388940.4	SCFD2-002	2221	639aa	ENSP00000373592.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCK6 Q8WU76	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503450.1	SCFD2-003	529	28aa	ENSP00000427202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCK6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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