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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LYNX1 ENSG00000180155

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Description

Ly6/neurotoxin 1 [Source:HGNC Symbol;Acc:29604]

Gene Synonyms

SLURP2

Location

Chromosome 8: 143,845,752-143,859,640 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 10 transcripts (splice variants), 90 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335822.5	LYNX1-001	1291	131aa	ENSP00000337950.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34951	Q9BZG9	NM_023946.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398906.1	LYNX1-201	4706	116aa	ENSP00000381878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6389	E5RIY6 E5RJW2 Q9BZG9	NM_177477.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395192.2	LYNX1-003	4535	116aa	ENSP00000378618.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6389	E5RIY6 E5RJW2 Q9BZG9	NM_177476.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000345173.6	LYNX1-007	866	116aa	ENSP00000332495.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6389	E5RIY6 E5RJW2 Q9BZG9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522929.1	LYNX1-005	637	84aa	ENSP00000429261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIY6 E5RJW2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523332.1	LYNX1-009	600	82aa	ENSP00000428713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V0Z9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000317543.7	LYNX1-002	599	97aa	ENSP00000319846.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34952	Q9BZG9	NM_177458.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520131.1	LYNX1-008	561	82aa	ENSP00000428157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJW2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521396.1	LYNX1-004	373	87aa	ENSP00000428465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YB12	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522906.1	LYNX1-006	230	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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