Gene: CLEC12A ENSG00000172322

Description

C-type lectin domain family 12, member A [Source:HGNC Symbol;Acc:31713]

Gene Synonyms

CLL-1, CLL1, DCAL-2, DCAL2, MICL

Location

Chromosome 12: 10,103,915-10,148,293 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 7 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355690.4	CLEC12A-007	1428	275aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55803	A8MVL9 Q5QGZ9	NM_001207010.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000304361.4	CLEC12A-001	1549	265aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8608	A8MVL9 Q5QGZ9	NM_201623.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434319.2	CLEC12A-002	1515	213aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVL9 Q5QGZ9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000350667.4	CLEC12A-003	699	232aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8609	Q5QGZ9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396507.3	CLEC12A-006	570	165aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVL9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449959.2	CLEC12A-004	1681	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543839.1	CLEC12A-005	1069	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Name

CLEC12A (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q5QGZ9

CCDS

This gene is a member of the Human CCDS set: CCDS55803.1, CCDS8608.1, CCDS8609.1

Ensembl version

ENSG00000172322.9

Other assemblies

This gene maps to 9,951,316-9,995,694 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:	OTTHUMG00000168396 (version 5)

Loading component

Favourite species

All species

Recent locations

Gene: CLEC12A ENSG00000172322

Summary